Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8wa2
Q-score: 0.457
Huang J, Tao H, Chen J, Shen Y, Lei J, Pan J, Yan C, Yan N
Cell (2024) [ Pubmed: 38552612 DOI: doi:10.1016/j.cell.2024.02.037 ]
- Alpha-l-arabinofuranose (150 Da, Ligand)
- Mst1 (206 kDa, Protein from Chlamydomonas reinhardtii)
- Alpha-d-galactopyranose (180 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Mstax (6 kDa, Protein from synthetic construct)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Mastigoneme (Cellular component from Chlamydomonas reinhardtii)
Cryo-EM Structure of native Photosystem II assembly intermediate fromChlamydomonas reinhardtii
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8r2i
Q-score: 0.533
Fadeeva M, Klaiman D, Kandiah E, Nelson N
Front Plant Sci (2023) 14 pp. 1334608-1334608 [ DOI: doi:10.3389/fpls.2023.1334608 Pubmed: 38322422 ]
- Protoporphyrin ix containing fe (616 Da, Ligand)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Photosystem ii assembly intermediate from chlamydomonas reinhardtii (Complex from Chlamydomonas reinhardtii)
- Photosystem ii reaction center protein h (7 kDa, Protein from Chlamydomonas reinhardtii)
- Cytochrome b559 subunit alpha (8 kDa, Protein from Chlamydomonas reinhardtii)
- Photosystem ii d2 protein (39 kDa, Protein from Chlamydomonas reinhardtii)
- Photosystem ii cp47 reaction center protein (53 kDa, Protein from Chlamydomonas reinhardtii)
- Photosystem ii reaction center protein ycf12 (3 kDa, Protein from Chlamydomonas reinhardtii)
- Chain u, predicted protein (11 kDa, Protein from Chlamydomonas reinhardtii)
- Octyl beta-d-glucopyranoside (292 Da, Ligand)
- Bicarbonate ion (61 Da, Ligand)
- Chlorophyll a (893 Da, Ligand)
- Photosystem ii reaction center protein k (4 kDa, Protein from Chlamydomonas reinhardtii)
- 2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone (749 Da, Ligand)
- Cytochrome b559 subunit beta (3 kDa, Protein from Chlamydomonas reinhardtii)
- Dodecyl-beta-d-maltoside (510 Da, Ligand)
- Beta-carotene (536 Da, Ligand)
- Photosystem ii protein d1 (36 kDa, Protein from Chlamydomonas reinhardtii)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- Fe (ii) ion (55 Da, Ligand)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Pheophytin a (871 Da, Ligand)
- Photosystem ii cp43 reaction center protein (46 kDa, Protein from Chlamydomonas reinhardtii)
- Water (18 Da, Ligand)
- Photosystem ii reaction center protein i (3 kDa, Protein from Chlamydomonas reinhardtii)
96-nm repeat unit of doublet microtubules from Chlamydomonas reinhardtii flagella
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8glv
Q-score: 0.338
Walton T, Gui M, Velkova S, Fassad MR, Hirst RA, Haarman E, O'Callaghan C, Bottier M, Burgoyne T, Mitchison HM, Brown A
Nature (2023) 618 pp. 625-633 [ DOI: doi:10.1038/s41586-023-06140-2 Pubmed: 37258679 ]
- Cilia- and flagella-associated protein 73 (35 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar associated protein (27 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar radial spoke protein 6 (48 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein 11 kda light chain, flagellar outer arm (13 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein light chain 10 (12 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar associated protein (32 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein regulatory complex protein 1 (79 kDa, Protein from Chlamydomonas reinhardtii)
- Axonemal inner arm i1 intermediate chain dynein ic138 (111 kDa, Protein from Chlamydomonas reinhardtii)
- Outer dynein arm protein 1 (62 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar radial spoke protein 2 (77 kDa, Protein from Chlamydomonas reinhardtii)
- Radial spoke protein 14 (40 kDa, Protein from Chlamydomonas reinhardtii)
- Radial spoke protein 10 (23 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar associated protein (267 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar associated protein (26 kDa, Protein from Chlamydomonas reinhardtii)
- Coiled-coil protein associated with protofilament ribbons (42 kDa, Protein from Chlamydomonas reinhardtii)
- Fap21 (49 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar associated protein (177 kDa, Protein from Chlamydomonas reinhardtii)
- Magnesium ion (24 Da, Ligand)
- Dynein 16 kda light chain, flagellar outer arm (17 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein axonemal light chain 1 (22 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein regulatory complex subunit 4 (55 kDa, Protein from Chlamydomonas reinhardtii)
- Radial spoke protein 3 (56 kDa, Protein from Chlamydomonas reinhardtii)
- Unknown (2 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein gamma chain, flagellar outer arm (513 kDa, Protein from Chlamydomonas reinhardtii)
- Heavy chain alpha (504 kDa, Protein from Chlamydomonas reinhardtii)
- Drc5 (43 kDa, Protein from Chlamydomonas reinhardtii)
- Inner-arm dynein f/i1 light chain (26 kDa, Protein from Chlamydomonas reinhardtii)
- Pacrg (34 kDa, Protein from Chlamydomonas reinhardtii)
- Aaa+ atpase domain-containing protein (523 kDa, Protein from Chlamydomonas reinhardtii)
- Cilia- and flagella-associated protein 299 (27 kDa, Protein from Chlamydomonas reinhardtii)
- Radial spoke protein 9 (29 kDa, Protein from Chlamydomonas reinhardtii)
- Fap306 (20 kDa, Protein from Chlamydomonas reinhardtii)
- Radial spike protein 8 (40 kDa, Protein from Chlamydomonas reinhardtii)
- Inner arm dynein light chain (13 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein regulatory complex subunit 3 (60 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar-associated protein 172 (101 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar associated protein (25 kDa, Protein from Chlamydomonas reinhardtii)
- Duf4201 domain-containing protein (55 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar outer dynein arm light chain 2 (15 kDa, Protein from Chlamydomonas reinhardtii)
- Aaa+ atpase domain-containing protein (464 kDa, Protein from Chlamydomonas reinhardtii)
- Fap44 (222 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein light chain 9 (12 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar associated protein (15 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein regulatory complex protein 10 (40 kDa, Protein from Chlamydomonas reinhardtii)
- Radial spoke protein 7 (54 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar associated protein (22 kDa, Protein from Chlamydomonas reinhardtii)
- 96-nm repeat unit of doublet microtubules from the flagella of chlamydomonas reinhardtii (Complex from Chlamydomonas reinhardtii)
- Fap251 (97 kDa, Protein from Chlamydomonas reinhardtii)
- Dhc2 (467 kDa, Protein from Chlamydomonas reinhardtii)
- Peptidyl-prolyl cis-trans isomerase (19 kDa, Protein from Chlamydomonas reinhardtii)
- Fap166 (23 kDa, Protein from Chlamydomonas reinhardtii)
- Caltractin (19 kDa, Protein from Chlamydomonas reinhardtii)
- Subunit of axonemal inner dynein (46 kDa, Protein from Chlamydomonas reinhardtii)
- Ic140 (109 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein-1-beta heavy chain, flagellar inner arm i1 complex (511 kDa, Protein from Chlamydomonas reinhardtii)
- Outer dynein arm-docking complex subunit 1 (83 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar associated protein (15 kDa, Protein from Chlamydomonas reinhardtii)
- Actin (41 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar associated protein (12 kDa, Protein from Chlamydomonas reinhardtii)
- Cilia- and flagella-associated protein 77 (29 kDa, Protein from Chlamydomonas reinhardtii)
- Atpase aaa-type core domain-containing protein (94 kDa, Protein from Chlamydomonas reinhardtii)
- Radial spoke protein 4 (49 kDa, Protein from Chlamydomonas reinhardtii)
- Outer dynein arm-docking complex protein dc3 (21 kDa, Protein from Chlamydomonas reinhardtii)
- Wd_repeats_region domain-containing protein (63 kDa, Protein from Chlamydomonas reinhardtii)
- Wd_repeats_region domain-containing protein (146 kDa, Protein from Chlamydomonas reinhardtii)
- Tubulin beta (49 kDa, Protein from Chlamydomonas reinhardtii)
- Meiosis-specific nuclear structural protein 1 (59 kDa, Protein from Chlamydomonas reinhardtii)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Dynein light chain roadblock lc7b (11 kDa, Protein from Chlamydomonas reinhardtii)
- Aaa+ atpase domain-containing protein (468 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein light chain roadblock lc7a (11 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar associated protein (16 kDa, Protein from Chlamydomonas reinhardtii)
- Aaa+ atpase domain-containing protein (478 kDa, Protein from Chlamydomonas reinhardtii)
- Fap253 (75 kDa, Protein from Chlamydomonas reinhardtii)
- Unknown (6 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein 14 kda light chain, flagellar outer arm (14 kDa, Protein from Chlamydomonas reinhardtii)
- Nucleoside diphosphate kinase (41 kDa, Protein from Chlamydomonas reinhardtii)
- Fap43 (199 kDa, Protein from Chlamydomonas reinhardtii)
- Nucleoside diphosphate kinase 6 (61 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar associated protein (53 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar associated protein (42 kDa, Protein from Chlamydomonas reinhardtii)
- Cilia- and flagella-associated protein 53 (56 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein regulatory complex protein 8 (18 kDa, Protein from Chlamydomonas reinhardtii)
- 28 kda inner dynein arm light chain, axonemal (28 kDa, Protein from Chlamydomonas reinhardtii)
- Calmodulin (18 kDa, Protein from Chlamydomonas reinhardtii)
- Cilia- and flagella-associated protein 100 (65 kDa, Protein from Chlamydomonas reinhardtii)
- Subunit of axonemal inner dynein (40 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar associated protein (48 kDa, Protein from Chlamydomonas reinhardtii)
- Ic97/casc1 n-terminal domain-containing protein (81 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar radial spoke protein 1 (87 kDa, Protein from Chlamydomonas reinhardtii)
- Protofilament ribbon protein of flagellar microtubules (72 kDa, Protein from Chlamydomonas reinhardtii)
- Fap34 (29 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein regulatory complex subunit 2 (64 kDa, Protein from Chlamydomonas reinhardtii)
- Radial spoke protein 11 (21 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein, 78 kda intermediate chain, flagellar outer arm (76 kDa, Protein from Chlamydomonas reinhardtii)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Cilia- and flagella-associated protein 61 (121 kDa, Protein from Chlamydomonas reinhardtii)
- Cfap91 domain-containing protein (134 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar outer dynein arm heavy chain beta (520 kDa, Protein from Chlamydomonas reinhardtii)
- Tubulin alpha (49 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar associated protein (43 kDa, Protein from Chlamydomonas reinhardtii)
- Axonemal inner arm dynein i1/f subunit (31 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein regulatory complex protein 9 (46 kDa, Protein from Chlamydomonas reinhardtii)
- Fap210 (53 kDa, Protein from Chlamydomonas reinhardtii)
- Fap52 (68 kDa, Protein from Chlamydomonas reinhardtii)
- Fap207 (28 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein regulatory complex subunit 6 (28 kDa, Protein from Chlamydomonas reinhardtii)
- Aaa+ atpase domain-containing protein (470 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein 18 kda light chain, flagellar outer arm (17 kDa, Protein from Chlamydomonas reinhardtii)
- Fap1 (21 kDa, Protein from Chlamydomonas reinhardtii)
- Duf4201 domain-containing protein (45 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar associated protein (27 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar associated protein (35 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar radial spoke protein 5 (55 kDa, Protein from Chlamydomonas reinhardtii)
- Cytochrome b5 heme-binding domain-containing protein (26 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar-associated protein 59 (105 kDa, Protein from Chlamydomonas reinhardtii)
- Radial spoke protein 15 (35 kDa, Protein from Chlamydomonas reinhardtii)
- Fap339 (10 kDa, Protein from Chlamydomonas reinhardtii)
- Radial spoke protein 16 (39 kDa, Protein from Chlamydomonas reinhardtii)
- Fap143 (29 kDa, Protein from Chlamydomonas reinhardtii)
- Cilia- and flagella-associated protein 45 (59 kDa, Protein from Chlamydomonas reinhardtii)
- Cilia- and flagella-associated protein 58 (102 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein 8 kda light chain, flagellar outer arm (10 kDa, Protein from Chlamydomonas reinhardtii)
- Fap385 (8 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar associated protein (39 kDa, Protein from Chlamydomonas reinhardtii)
- Cilia- and flagella-associated protein 20 (22 kDa, Protein from Chlamydomonas reinhardtii)
- Dhc_n2 domain-containing protein (465 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar associated protein (25 kDa, Protein from Chlamydomonas reinhardtii)
- Fap129 (51 kDa, Protein from Chlamydomonas reinhardtii)
- Protein flattop homolog (15 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein light chain tctex1 (12 kDa, Protein from Chlamydomonas reinhardtii)
In situ outer dynein arm from Chlamydomonas reinhardtii in a pre-power stroke state
Resolution: 38.0 Å
EM Method: Subtomogram averaging
Fitted PDBs: 8bwy
Q-score: 0.039
Zimmermann N, Noga A, Obbineni JM, Ishikawa T
EMBO J (2023) 42 pp. e112466-e112466 [ DOI: doi:10.15252/embj.2022112466 Pubmed: 37051721 ]
- Dynein light chain (13 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein light chain (10 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein heavy chain, outer arm protein (534 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein light chain 2a (15 kDa, Protein from Chlamydomonas reinhardtii)
- Calmodulin (35 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein light chain tctex-type 1 protein (13 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein intermediate chain 2 (77 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein light chain roadblock-type 2 protein (14 kDa, Protein from Chlamydomonas reinhardtii)
- Flagellar outer dynein arm intermediate protein, putative (77 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein light chain (10 kDa, Protein from Chlamydomonas reinhardtii)
- Thioredoxin (12 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein-1-alpha heavy chain, flagellar inner arm i1 complex protein, putative (475 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein light chain (12 kDa, Protein from Chlamydomonas reinhardtii)
- Docking complex 1/2 protein (11 kDa, Protein from Chlamydomonas reinhardtii)
- Outer arm dynein beta heavy chain (530 kDa, Protein from Chlamydomonas reinhardtii)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- In situ outer dynein arm (Cellular component from Chlamydomonas reinhardtii)
- Dynein light chain (12 kDa, Protein from Chlamydomonas reinhardtii)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Dynein light chain (10 kDa, Protein from Chlamydomonas reinhardtii)
- Dynein light chain roadblock-type 2 protein (18 kDa, Protein from Chlamydomonas reinhardtii)
In situ outer dynein arm from Chlamydomonas reinhardtii in the post-power stroke state
Resolution: 30.3 Å
EM Method: Subtomogram averaging
Fitted PDBs: 8bx8
Q-score: 0.043
Zimmermann N, Noga A, Obbineni JM, Ishikawa T
EMBO J (2023) 42 pp. e112466-e112466 [ DOI: doi:10.15252/embj.2022112466 Pubmed: 37051721 ]
- Dynein light chain (11 kDa, Protein from Tetrahymena thermophila)
- Dynein light chain tctex-type 1 protein (13 kDa, Protein from Tetrahymena thermophila)
- Dynein light chain 4a (17 kDa, Protein from Tetrahymena thermophila)
- Thioredoxin (14 kDa, Protein from Tetrahymena thermophila)
- Dynein-1-alpha heavy chain, flagellar inner arm i1 complex protein, putative (475 kDa, Protein from Tetrahymena thermophila)
- Flagellar outer dynein arm intermediate protein, putative (77 kDa, Protein from Tetrahymena thermophila)
- Dynein light chain (12 kDa, Protein from Tetrahymena thermophila)
- Dynein light chain (12 kDa, Protein from Tetrahymena thermophila)
- Dynein light chain (10 kDa, Protein from Tetrahymena thermophila)
- Dynein light chain (10 kDa, Protein from Tetrahymena thermophila)
- Dynein light chain roadblock-type 2 protein (18 kDa, Protein from Tetrahymena thermophila)
- Dynein light chain 2a (15 kDa, Protein from Tetrahymena thermophila)
- Dynein light chain 1 (22 kDa, Protein from Tetrahymena thermophila)
- Outer arm dynein beta heavy chain (530 kDa, Protein from Tetrahymena thermophila)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- In situ outer dynein arm (Cellular component from Chlamydomonas reinhardtii)
- Dynein light chain roadblock-type 2 protein (14 kDa, Protein from Tetrahymena thermophila)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Dynein heavy chain, outer arm protein (534 kDa, Protein from Tetrahymena thermophila)
- Dynein light chain (10 kDa, Protein from Tetrahymena thermophila)
- Dynein intermediate chain 2 (76 kDa, Protein from Tetrahymena thermophila)
- Magnesium ion (24 Da, Ligand)
Chlamydomonas reinhardtii TSP9 mutant small Photosystem I complex
Resolution: 2.52 Å
EM Method: Single-particle
Fitted PDBs: 7r3k
Q-score: 0.633
Schwartz T, Fadeeva M, Klaiman D, Nelson N
Biomolecules (2023) 13 [ DOI: doi:10.3390/biom13030537 Pubmed: 36979472 ]
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Diacyl glycerol (625 Da, Ligand)
- Chlorophyll a-b binding protein, chloroplastic (lhca4) (28 kDa, Protein from Chlamydomonas reinhardtii)
- Photosystem i reaction center subunit iii, chloroplastic (24 kDa, Protein from Chlamydomonas reinhardtii)
- 1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol (795 Da, Ligand)
- Ergosterol (396 Da, Ligand)
- Chlorophyll a-b binding protein, chloroplastic (27 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll a isomer (893 Da, Ligand)
- (1~{s})-3,5,5-trimethyl-4-[(1~{e},3~{e},5~{e},7~{e},9~{e},11~{e},13~{e},15~{e},17~{e})-3,7,12,16-tetramethyl-18-[(4~{s})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol (568 Da, Ligand)
- Photosystem i iron-sulfur center (8 kDa, Protein from Chlamydomonas reinhardtii)
- Photosystem i reaction center subunit viii (10 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll a-b binding protein, chloroplastic (32 kDa, Protein from Chlamydomonas reinhardtii)
- Photosystem i p700 chlorophyll a apoprotein a2 (82 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll b (907 Da, Ligand)
- Chlorophyll a-b binding protein, chloroplastic (25 kDa, Protein from Chlamydomonas reinhardtii)
- 1,2-diacyl-glycerol-3-sn-phosphate (704 Da, Ligand)
- C. reinhardtii photosystem i supercomplex (780 kDa, Complex from Chlamydomonas reinhardtii)
- Chlorophyll a (893 Da, Ligand)
- Photosystem i reaction center subunit v, chloroplastic (13 kDa, Protein from Chlamydomonas reinhardtii)
- Dodecyl-beta-d-maltoside (510 Da, Ligand)
- Sphingosine (299 Da, Ligand)
- Photosystem i reaction center subunit ii, chloroplastic (21 kDa, Protein from Chlamydomonas reinhardtii)
- Beta-carotene (536 Da, Ligand)
- Photosystem i p700 chlorophyll a apoprotein a1 (83 kDa, Protein from Chlamydomonas reinhardtii)
- Palmitic acid (256 Da, Ligand)
- Lauric acid (200 Da, Ligand)
- Photosystem i reaction center subunit iv, chloroplastic (10 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll a-b binding protein, chloroplastic (26 kDa, Protein from Chlamydomonas reinhardtii)
- Calcium ion (40 Da, Ligand)
- Chlorophyll a-b binding protein, chloroplastic (23 kDa, Protein from Chlamydomonas reinhardtii)
- Digalactosyl diacyl glycerol (dgdg) (949 Da, Ligand)
- Chlorophyll a-b binding protein, chloroplastic (28 kDa, Protein from Chlamydomonas reinhardtii)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Phylloquinone (450 Da, Ligand)
- (3r,3'r,6s)-4,5-didehydro-5,6-dihydro-beta,beta-carotene-3,3'-diol (568 Da, Ligand)
- Photosystem i reaction center subunit ix (4 kDa, Protein from Chlamydomonas reinhardtii)
- (3r)-beta,beta-caroten-3-ol (552 Da, Ligand)
- Photosystem i reaction center subunit psak, chloroplastic (11 kDa, Protein from Chlamydomonas reinhardtii)
- Iron/sulfur cluster (351 Da, Ligand)
- Water (18 Da, Ligand)
Native Photosystem I of Chlamydomonas reinhardtii
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7wyi
Q-score: 0.39
Gerle C, Misumi Y, Kawamoto A, Tanaka H, Kubota-Kawai H, Tokutsu R, Kim E, Chorev D, Abe K, Robinson CV, Mitsuoka K, Minagawa J, Kurisu G
Biochim Biophys Acta Bioenerg (2023) 1864 pp. 148986-148986 [ DOI: doi:10.1016/j.bbabio.2023.148986 Pubmed: 37270022 ]
- Chlorophyll a-b binding protein, chloroplastic (23 kDa, Protein from Chlamydomonas reinhardtii)
- Native photosystem i with bound light harvesting complex i from chlamydomonas reinhardtii thylakoid membranes. (765 kDa, Complex from Chlamydomonas reinhardtii)
- Photosystem i reaction center subunit iii, chloroplastic (24 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll a-b binding protein, chloroplastic (27 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll a isomer (893 Da, Ligand)
- Chlorophyll a-b binding protein, chloroplastic (28 kDa, Protein from Chlamydomonas reinhardtii)
- Photosystem i iron-sulfur center (8 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll a-b binding protein, chloroplastic (32 kDa, Protein from Chlamydomonas reinhardtii)
- Photosystem i p700 chlorophyll a apoprotein a2 (82 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll b (907 Da, Ligand)
- Chlorophyll a-b binding protein, chloroplastic (25 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll a (893 Da, Ligand)
- Photosystem i reaction center subunit ii, chloroplastic (21 kDa, Protein from Chlamydomonas reinhardtii)
- Photosystem i p700 chlorophyll a apoprotein a1 (83 kDa, Protein from Chlamydomonas reinhardtii)
- Photosystem i reaction center subunit iv, chloroplastic (10 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll a-b binding protein, chloroplastic (26 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll a-b binding protein, chloroplastic (23 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll a-b binding protein, chloroplastic (28 kDa, Protein from Chlamydomonas reinhardtii)
- Phylloquinone (450 Da, Ligand)
- Photosystem i reaction center subunit ix (4 kDa, Protein from Chlamydomonas reinhardtii)
- Iron/sulfur cluster (351 Da, Ligand)
PSI-LHCI from Chlamydomonas reinhardtii with bound ferredoxin
Resolution: 4.9 Å
EM Method: Single-particle
Fitted PDBs: 7wzn
Q-score: 0.295
Gerle C, Misumi Y, Kawamoto A, Tanaka H, Kubota-Kawai H, Tokutsu R, Kim E, Chorev D, Abe K, Robinson CV, Mitsuoka K, Minagawa J, Kurisu G
Biochim Biophys Acta Bioenerg (2023) 1864 pp. 148986-148986 [ DOI: doi:10.1016/j.bbabio.2023.148986 Pubmed: 37270022 ]
- Photosystem i from chlamydomonas reinhardtii with bound ferredoxin. (785 kDa, Complex)
- Chlorophyll a-b binding protein, chloroplastic (23 kDa, Protein from Chlamydomonas reinhardtii)
- Photosystem i reaction center subunit iii, chloroplastic (24 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll a-b binding protein, chloroplastic (27 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll a isomer (893 Da, Ligand)
- Ferredoxin, chloroplastic (13 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll a-b binding protein, chloroplastic (28 kDa, Protein from Chlamydomonas reinhardtii)
- Photosystem i iron-sulfur center (8 kDa, Protein from Chlamydomonas reinhardtii)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Chlorophyll a-b binding protein, chloroplastic (32 kDa, Protein from Chlamydomonas reinhardtii)
- Photosystem i p700 chlorophyll a apoprotein a2 (82 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll b (907 Da, Ligand)
- Chlorophyll a-b binding protein, chloroplastic (25 kDa, Protein from Chlamydomonas reinhardtii)
- Ferredoxin (Complex from Chlamydomonas reinhardtii)
- Chlorophyll a (893 Da, Ligand)
- Membrane supercomplex (Complex from Chlamydomonas reinhardtii)
- Photosystem i reaction center subunit ii, chloroplastic (21 kDa, Protein from Chlamydomonas reinhardtii)
- Photosystem i p700 chlorophyll a apoprotein a1 (83 kDa, Protein from Chlamydomonas reinhardtii)
- Photosystem i reaction center subunit iv, chloroplastic (10 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll a-b binding protein, chloroplastic (26 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll a-b binding protein, chloroplastic (23 kDa, Protein from Chlamydomonas reinhardtii)
- Chlorophyll a-b binding protein, chloroplastic (28 kDa, Protein from Chlamydomonas reinhardtii)
- Phylloquinone (450 Da, Ligand)
- Photosystem i reaction center subunit ix (4 kDa, Protein from Chlamydomonas reinhardtii)
- Iron/sulfur cluster (351 Da, Ligand)
Cryo-EM structure of TOC-TIC supercomplex from Chlamydomonas reinhardtii
Resolution: 2.77 Å
EM Method: Single-particle
Fitted PDBs: 7xzi
Q-score: 0.517
Liu H, Li A, Rochaix JD, Liu Z
Nature (2023) 615 pp. 349-357 [ Pubmed: 36702157 DOI: doi:10.1038/s41586-023-05744-y ]
- Toc75 (87 kDa, Protein from Chlamydomonas smithii)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Ctap5 (42 kDa, Protein from Chlamydomonas smithii)
- Digitonin (1 kDa, Ligand)
- Protein tic 20 (29 kDa, Protein from Chlamydomonas smithii)
- Dodecane (170 Da, Ligand)
- Tic100 (105 kDa, Protein from Chlamydomonas smithii)
- Inositol hexakisphosphate (660 Da, Ligand)
- Tic56 (28 kDa, Protein from Chlamydomonas smithii)
- A membrane protein complex (812 kDa, Complex from Chlamydomonas reinhardtii)
- Unknown peptide (1 kDa, Protein from Chlamydomonas smithii)
- Toc34 (44 kDa, Protein from Chlamydomonas smithii)
- Simp2 (13 kDa, Protein from Chlamydomonas smithii)
- Hexadecane (226 Da, Ligand)
- Toc90 (102 kDa, Protein from Chlamydomonas smithii)
- Tic214 (232 kDa, Protein from Chlamydomonas smithii)
- Tic15 (14 kDa, Protein from Chlamydomonas smithii)
- Simp3 (21 kDa, Protein from Chlamydomonas smithii)
- Ctap4 (39 kDa, Protein from Chlamydomonas smithii)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Ctap3 (51 kDa, Protein from Chlamydomonas smithii)
Cryo-EM structure of TOC complex from Chlamydomonas reinhardtii.
Resolution: 2.97 Å
EM Method: Single-particle
Fitted PDBs: 7xzj
Q-score: 0.433
Liu H, Li A, Rochaix JD, Liu Z
Nature (2023) 615 pp. 349-357 [ Pubmed: 36702157 DOI: doi:10.1038/s41586-023-05744-y ]
- Tic100 (105 kDa, Protein from Chlamydomonas smithii)
- Toc34 (44 kDa, Protein from Chlamydomonas smithii)
- Inositol hexakisphosphate (660 Da, Ligand)
- Unknown peptide (2 kDa, Protein from Chlamydomonas smithii)
- Toc75 (87 kDa, Protein from Chlamydomonas smithii)
- Toc90 (102 kDa, Protein from Chlamydomonas smithii)
- Structure of a outer membrane protein complex (Complex from Chlamydomonas reinhardtii)
- Ctap3 (51 kDa, Protein from Chlamydomonas smithii)
- Toc39 (39 kDa, Protein from Chlamydomonas smithii)
- Tic214 (232 kDa, Protein from Chlamydomonas smithii)